Supplementary data

Supplementary data

Hikobia

The pdf of Supplementary Figures S1 & S2 of Phan et al. (2021)

• Phan, Q. C., Nakahara-Tsubota, M., Inoue, Y. & Tsubota, H. 2021. New record of Dysphania pumilio (Amaranthaceae) for Hiroshima Prefecture, southwest Japan. Hikobia 18: 145-156.
  • Supplementary figures
    • ファイル:FigS1 Phan et al 2021 Hikobia.pdf
      • Fig. S1. Phylogenetic tree of the family Amaranthaceae based on the nuclear ribosomal internal transcribed spacer (ITS) region, depicted by RAxML-NG version 0.9.0git. The evolutionary history was inferred by using the maximum likelihood method based on the SYM + I + G model. Accession numbers were listed behind each name. Statistical support values more than 50 % obtained by RAxML-NG for bootstrap probabilities (BP) with 10,000 replicates and BEAST for Bayesian posterior probabilities (PP) with 10,000,000 replicates are shown on or near nodes (BP/PP). The tree was rooted at the midpoint. The pdf of Supplementary Figure S1 can be downloadable via the web link https://www.digital-museum.hiroshima-u.ac.jp/~main/index.php/Supplementary_data.
    • ファイル:FigS2 Phan et al 2021 Hikobia.pdf
      • Fig. S2. Phylogenetic tree of the family Amaranthaceae based on the chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit (rbcL) gene sequence, depicted by RAxML-NG version 0.9.0git. The evolutionary history was inferred by using the maximum likelihood method based on the TVM + I + G model. Accession numbers were listed behind each name. Statistical support values more than 50 % obtained by RAxML-NG for bootstrap probabilities (BP) with 10,000 replicates and BEAST for Bayesian posterior probabilities (PP) with 10,000,000 replicates are shown on or near nodes (BP/PP). The tree was rooted at the midpoint. The pdf of Supplementary Figure S2 can be downloadable via the web link https://www.digital-museum.hiroshima-u.ac.jp/~main/index.php/Supplementary_data.
• Phan, Q. C., Nakahara-Tsubota, M., Inoue, Y. & Tsubota, H. 2021. New record of Dysphania pumilio (Amaranthaceae) for Hiroshima Prefecture, southwest Japan. Hikobia 18: 145-156.
  • Supplementary figures
    • ファイル:FigS1 Phan et al 2021 Hikobia.pdf
      • Fig. S1. Phylogenetic tree of the family Amaranthaceae based on the nuclear ribosomal internal transcribed spacer (ITS) region, depicted by RAxML-NG version 0.9.0git. The evolutionary history was inferred by using the maximum likelihood method based on the SYM + I + G model. Accession numbers were listed behind each name. Statistical support values more than 50 % obtained by RAxML-NG for bootstrap probabilities (BP) with 10,000 replicates and BEAST for Bayesian posterior probabilities (PP) with 10,000,000 replicates are shown on or near nodes (BP/PP). The tree was rooted at the midpoint. The pdf of Supplementary Figure S1 can be downloadable via the web link https://www.digital-museum.hiroshima-u.ac.jp/~main/index.php/Supplementary_data.
    • ファイル:FigS2 Phan et al 2021 Hikobia.pdf
      • Fig. S2. Phylogenetic tree of the family Amaranthaceae based on the chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit (rbcL) gene sequence, depicted by RAxML-NG version 0.9.0git. The evolutionary history was inferred by using the maximum likelihood method based on the TVM + I + G model. Accession numbers were listed behind each name. Statistical support values more than 50 % obtained by RAxML-NG for bootstrap probabilities (BP) with 10,000 replicates and BEAST for Bayesian posterior probabilities (PP) with 10,000,000 replicates are shown on or near nodes (BP/PP). The tree was rooted at the midpoint. The pdf of Supplementary Figure S2 can be downloadable via the web link https://www.digital-museum.hiroshima-u.ac.jp/~main/index.php/Supplementary_data.

The csv file of Supplementary Data 1-3 of Sheng et al. (2022)

• Sheng, Z.-P., Wasaki, J. & Tsubota, H. 2022. A preliminary study on the influence of invasive plant through allelopathy: effects of Chinese tallow tree, Triadica sebifera (Euphorbiaceae), on its rhizosphere microbial community in Miyajima Island, SW Japan. Hikobia 18: 199-220.
  • Supplementary data. The files of Supplementary Data 1-3 can be downloadable via the web link https://www.digital-museum.hiroshima-u.ac.jp/~main/index.php/Supplementary_data.
    • ファイル:Appendix5 Supplementary data 1 Sheng et al 2022 Hikobia.xls
      • Appendix 5. Supplementary data 1: the relative abundance with log-transformation of OTUs between M (N = 3) and S (N = 3) groups. M responds to the native site (Murohama); S responds to the invasive site (Shobunjo).
    • ファイル:Appendix6 Supplementary data 2 Sheng et al 2022 Hikobia.xls
      • Appendix 6. Supplementary data 2: all predicted bacterial metabolic pathways between M (N = 3) and S (N = 3) groups. M responds to the native site (Murohama); S responds to the invasive site (Shobunjo).
    • ファイル:Appendix7 Supplementary data 3 Sheng et al 2022 Hikobia.xls
      • Appendix 7. Supplementary data 3: the two predicted potential degradation of allelopathic compounds pathway, as well as associated bacterial groups between M (N = 3) and S (N = 3) groups. M responds to the native site (Murohama); S responds to the invasive site (Shobunjo).